consciousness/src/hippocampus/store/ops.rs

// Mutation operations on the store
//
// CRUD (upsert, delete), maintenance (decay, cap_degree), and graph metrics.

use super::{capnp, index, types::*, Store};

use anyhow::{anyhow, bail, Result};
use std::collections::{HashMap, HashSet};

/// Fallback provenance for non-tool-dispatch paths (CLI, digest, etc.).
/// Tool dispatch passes provenance directly through thought::dispatch.
pub fn current_provenance() -> String {
    std::env::var("POC_PROVENANCE")
        .unwrap_or_else(|_| "manual".to_string())
}

impl Store {
    /// Add or update a node (appends to log + updates index).
    pub fn upsert_node(&mut self, mut node: Node) -> Result<()> {
        if let Some(existing) = self.get_node(&node.key)? {
            node.uuid = existing.uuid;
            node.version = existing.version + 1;
        }
        let offset = self.append_nodes(&[node.clone()])?;
        if let Some(ref database) = self.db {
            index::index_node(database, &node.key, offset, &node.uuid)?;
        }
        Ok(())
    }

    /// Add a relation (appends to log + updates cache + indexes)
    pub fn add_relation(&mut self, rel: Relation) -> Result<()> {
        self.append_relations(std::slice::from_ref(&rel))?;
        if let Some(db) = &self.db {
            index::index_relation(db, &rel.source, &rel.target, rel.strength, rel.rel_type as u8)?;
        }
        self.relations.push(rel);
        Ok(())
    }

    /// Recent nodes by provenance, sorted newest-first. Returns (key, timestamp).
    pub fn recent_by_provenance(&self, provenance: &str, limit: usize) -> Vec<(String, i64)> {
        let db = match self.db.as_ref() {
            Some(db) => db,
            None => return Vec::new(),
        };
        let keys = match index::all_keys(db) {
            Ok(keys) => keys,
            Err(_) => return Vec::new(),
        };
        let mut nodes: Vec<_> = keys.iter()
            .filter_map(|key| {
                let offset = index::get_offset(db, key).ok()??;
                let node = capnp::read_node_at_offset(offset).ok()?;
                if !node.deleted && node.provenance == provenance {
                    Some((key.clone(), node.timestamp))
                } else {
                    None
                }
            })
            .collect();
        nodes.sort_by(|a, b| b.1.cmp(&a.1));
        nodes.truncate(limit);
        nodes
    }

    /// Upsert a node: update if exists (and content changed), create if not.
    /// Returns: "created", "updated", or "unchanged".
    ///
    /// Provenance is determined by the POC_PROVENANCE env var if set,
    /// otherwise defaults to Manual.
    pub fn upsert(&mut self, key: &str, content: &str) -> Result<&'static str> {
        let prov = current_provenance();
        self.upsert_provenance(key, content, &prov)
    }

    /// Upsert with explicit provenance (for agent-created nodes).
    pub fn upsert_provenance(&mut self, key: &str, content: &str, provenance: &str) -> Result<&'static str> {
        if let Some(existing) = self.get_node(key)? {
            if existing.content == content {
                return Ok("unchanged");
            }
            let mut node = existing;
            node.content = content.to_string();
            node.provenance = provenance.to_string();
            node.timestamp = now_epoch();
            node.version += 1;
            let offset = self.append_nodes(std::slice::from_ref(&node))?;
            if let Some(ref database) = self.db {
                index::index_node(database, &node.key, offset, &node.uuid)?;
            }
            Ok("updated")
        } else {
            let mut node = new_node(key, content);
            node.provenance = provenance.to_string();
            let offset = self.append_nodes(std::slice::from_ref(&node))?;
            if let Some(ref database) = self.db {
                index::index_node(database, &node.key, offset, &node.uuid)?;
            }
            Ok("created")
        }
    }

    /// Soft-delete a node (appends deleted version, removes from index).
    pub fn delete_node(&mut self, key: &str) -> Result<()> {
        let prov = current_provenance();

        let node = self.get_node(key)?
            .ok_or_else(|| anyhow!("No node '{}'", key))?;
        let uuid = node.uuid;
        let mut deleted = node;
        deleted.deleted = true;
        deleted.version += 1;
        deleted.provenance = prov;
        deleted.timestamp = now_epoch();
        self.append_nodes(std::slice::from_ref(&deleted))?;
        if let Some(ref database) = self.db {
            index::remove_node(database, key, &uuid)?;
        }
        Ok(())
    }

    /// Rename a node: change its key, update debug strings on all edges.
    ///
    /// Graph edges (source/target UUIDs) are unaffected — they're already
    /// UUID-based. We update the human-readable source_key/target_key strings
    /// on relations, and created_at is preserved untouched.
    pub fn rename_node(&mut self, old_key: &str, new_key: &str) -> Result<()> {
        if old_key == new_key {
            return Ok(());
        }
        if self.contains_key(new_key)? {
            bail!("Key '{}' already exists", new_key);
        }
        let node = self.get_node(old_key)?
            .ok_or_else(|| anyhow!("No node '{}'", old_key))?;

        let prov = current_provenance();

        // New version under the new key
        let mut renamed = node.clone();
        renamed.key = new_key.to_string();
        renamed.version += 1;
        renamed.provenance = prov.clone();
        renamed.timestamp = now_epoch();

        // Deletion record for the old key (same UUID, independent version counter)
        let mut tombstone = node.clone();
        tombstone.deleted = true;
        tombstone.version += 1;
        tombstone.provenance = prov;
        tombstone.timestamp = now_epoch();

        // Persist node changes
        let offset = self.append_nodes(&[renamed.clone(), tombstone.clone()])?;

        // Update node index: remove old key, add renamed
        if let Some(ref database) = self.db {
            index::remove_node(database, old_key, &tombstone.uuid)?;
            index::index_node(database, new_key, offset, &renamed.uuid)?;

            // Find relations touching this node's UUID and update their key strings
            let node_uuid = node.uuid;
            let edges = index::edges_for_node(database, &node_uuid)?;

            // Build uuid → key map for the other endpoints
            let keys = index::all_keys(database)?;
            let mut uuid_to_key: HashMap<[u8; 16], String> = HashMap::new();
            for k in &keys {
                if let Ok(Some(u)) = index::get_uuid_for_key(database, k) {
                    uuid_to_key.insert(u, k.clone());
                }
            }
            // Update the renamed node's mapping
            uuid_to_key.insert(node_uuid, new_key.to_string());

            let mut updated_rels = Vec::new();
            for (other_uuid, strength, rel_type, is_outgoing) in edges {
                let other_key = uuid_to_key.get(&other_uuid).cloned().unwrap_or_default();
                let (src_uuid, tgt_uuid, src_key, tgt_key) = if is_outgoing {
                    (node_uuid, other_uuid, new_key.to_string(), other_key)
                } else {
                    (other_uuid, node_uuid, other_key, new_key.to_string())
                };
                let mut rel = new_relation(src_uuid, tgt_uuid,
                    RelationType::from_u8(rel_type), strength,
                    &src_key, &tgt_key);
                rel.version = 2; // indicate update
                updated_rels.push(rel);
            }

            if !updated_rels.is_empty() {
                self.append_relations(&updated_rels)?;
            }
        }

        Ok(())
    }

    /// Cap node degree by soft-deleting edges from mega-hubs.
    pub fn cap_degree(&mut self, max_degree: usize) -> Result<(usize, usize)> {
        let db = self.db.as_ref().ok_or_else(|| anyhow!("store not loaded"))?;
        let keys = index::all_keys(db)?;

        // Build uuid ↔ key maps
        let mut uuid_to_key: HashMap<[u8; 16], String> = HashMap::new();
        let mut key_to_uuid: HashMap<String, [u8; 16]> = HashMap::new();
        for key in &keys {
            if let Ok(Some(uuid)) = index::get_uuid_for_key(db, key) {
                uuid_to_key.insert(uuid, key.clone());
                key_to_uuid.insert(key.clone(), uuid);
            }
        }

        // Count degrees per node
        let mut node_degree: HashMap<String, usize> = HashMap::new();
        for key in &keys {
            let uuid = match key_to_uuid.get(key) {
                Some(u) => u,
                None => continue,
            };
            let edges = index::edges_for_node(db, uuid)?;
            node_degree.insert(key.clone(), edges.len());
        }

        let mut to_delete: HashSet<([u8; 16], [u8; 16])> = HashSet::new();
        let mut hubs_capped = 0;

        for key in &keys {
            let uuid = match key_to_uuid.get(key) {
                Some(u) => *u,
                None => continue,
            };
            let edges = index::edges_for_node(db, &uuid)?;
            if edges.len() <= max_degree { continue; }

            // Separate auto vs manual edges: (source, target, sort_key)
            let mut auto_edges: Vec<([u8; 16], [u8; 16], f32)> = Vec::new();
            let mut link_edges: Vec<([u8; 16], [u8; 16], usize)> = Vec::new();

            for (other_uuid, strength, rel_type, is_outgoing) in &edges {
                // Canonical edge direction (source < target by outgoing flag)
                let (src, tgt) = if *is_outgoing { (uuid, *other_uuid) } else { (*other_uuid, uuid) };
                if to_delete.contains(&(src, tgt)) { continue; }

                let other_key = match uuid_to_key.get(other_uuid) {
                    Some(k) => k,
                    None => continue,
                };

                if *rel_type == RelationType::Auto as u8 {
                    auto_edges.push((src, tgt, *strength));
                } else {
                    let other_deg = node_degree.get(other_key).copied().unwrap_or(0);
                    link_edges.push((src, tgt, other_deg));
                }
            }

            let active_count = auto_edges.len() + link_edges.len();
            if active_count <= max_degree { continue; }

            let excess = active_count - max_degree;

            // Prune weakest auto edges first
            auto_edges.sort_by(|a, b| a.2.total_cmp(&b.2));
            for (src, tgt, _) in auto_edges.iter().take(excess) {
                to_delete.insert((*src, *tgt));
            }

            // Then prune links to highest-degree nodes
            let remaining = excess.saturating_sub(auto_edges.len());
            if remaining > 0 {
                link_edges.sort_by(|a, b| b.2.cmp(&a.2));
                for (src, tgt, _) in link_edges.iter().take(remaining) {
                    to_delete.insert((*src, *tgt));
                }
            }

            hubs_capped += 1;
        }

        // Collect edge info for deletion
        let mut to_remove: Vec<([u8; 16], [u8; 16], f32, u8, String, String)> = Vec::new();
        for (source_uuid, target_uuid) in &to_delete {
            let edges = index::edges_for_node(db, source_uuid)?;
            if let Some((_, strength, rel_type, _)) = edges.iter()
                .find(|(other, _, _, out)| *other == *target_uuid && *out)
            {
                let source_key = uuid_to_key.get(source_uuid).cloned().unwrap_or_default();
                let target_key = uuid_to_key.get(target_uuid).cloned().unwrap_or_default();
                to_remove.push((*source_uuid, *target_uuid, *strength, *rel_type, source_key, target_key));
            }
        }

        // Now mutate: remove from index and persist tombstones
        let pruned_count = to_remove.len();
        for (source_uuid, target_uuid, strength, rel_type, source_key, target_key) in to_remove {
            if let Some(db) = &self.db {
                index::remove_relation(db, &source_uuid, &target_uuid, strength, rel_type)?;
            }
            let mut rel = new_relation(source_uuid, target_uuid,
                RelationType::from_u8(rel_type), strength,
                &source_key, &target_key);
            rel.deleted = true;
            rel.version = 2;
            self.append_relations(std::slice::from_ref(&rel))?;
        }

        Ok((hubs_capped, pruned_count))
    }

    /// Set a node's weight directly. Returns (old, new).
    pub fn set_weight(&mut self, key: &str, weight: f32) -> Result<(f32, f32)> {
        let weight = weight.clamp(0.01, 1.0);
        let mut node = self.get_node(key)?
            .ok_or_else(|| anyhow!("node not found: {}", key))?;
        let old = node.weight;
        if (old - weight).abs() < 0.001 {
            return Ok((old, weight)); // unchanged
        }
        node.weight = weight;
        node.version += 1;
        node.timestamp = now_epoch();
        let offset = self.append_nodes(std::slice::from_ref(&node))?;
        if let Some(ref database) = self.db {
            index::index_node(database, key, offset, &node.uuid)?;
        }
        Ok((old, weight))
    }

    /// Set the strength of a link between two nodes.
    /// Returns the old strength. Creates link if it doesn't exist.
    pub fn set_link_strength(&mut self, source: &str, target: &str, strength: f32) -> Result<f32> {
        let strength = strength.clamp(0.01, 1.0);

        let source_uuid = self.get_node(source)?
            .map(|n| n.uuid)
            .ok_or_else(|| anyhow!("source not found: {}", source))?;
        let target_uuid = self.get_node(target)?
            .map(|n| n.uuid)
            .ok_or_else(|| anyhow!("target not found: {}", target))?;

        // Find existing edge via index
        let db = self.db.as_ref().ok_or_else(|| anyhow!("store not loaded"))?;
        let edges = index::edges_for_node(db, &source_uuid)?;
        let existing = edges.iter().find(|(other, _, _, _)| *other == target_uuid);

        if let Some((_, old_strength, rel_type, _)) = existing {
            let old = *old_strength;
            // Remove old edge from index, add updated one
            index::remove_relation(db, &source_uuid, &target_uuid, old, *rel_type)?;
            index::index_relation(db, &source_uuid, &target_uuid, strength, *rel_type)?;

            // Append updated relation to log
            let mut rel = new_relation(source_uuid, target_uuid,
                RelationType::from_u8(*rel_type), strength, source, target);
            rel.version = 2; // indicate update
            self.append_relations(std::slice::from_ref(&rel))?;
            Ok(old)
        } else {
            // Create new link
            self.add_link(source, target, "link_set")?;
            // Update its strength
            let db = self.db.as_ref().ok_or_else(|| anyhow!("store not loaded"))?;
            index::remove_relation(db, &source_uuid, &target_uuid, 0.1, RelationType::Link as u8)?;
            index::index_relation(db, &source_uuid, &target_uuid, strength, RelationType::Link as u8)?;
            Ok(0.0)
        }
    }

    /// Add a link between two nodes with Jaccard-based initial strength.
    /// Returns the strength, or a message if the link already exists.
    pub fn add_link(&mut self, source: &str, target: &str, provenance: &str) -> Result<f32> {
        let source_uuid = self.get_node(source)?
            .map(|n| n.uuid)
            .ok_or_else(|| anyhow!("source not found: {}", source))?;
        let target_uuid = self.get_node(target)?
            .map(|n| n.uuid)
            .ok_or_else(|| anyhow!("target not found: {}", target))?;

        // Check for existing via index
        if let Some(db) = &self.db {
            let edges = index::edges_for_node(db, &source_uuid)?;
            let exists = edges.iter().any(|(other, _, _, _)| *other == target_uuid);
            if exists {
                bail!("link already exists: {} ↔ {}", source, target);
            }
        }

        let graph = self.build_graph();
        let jaccard = graph.jaccard(source, target);
        let strength = (jaccard * 3.0).clamp(0.1, 1.0) as f32;

        let mut rel = new_relation(
            source_uuid, target_uuid,
            RelationType::Link, strength,
            source, target,
        );
        rel.provenance = provenance.to_string();
        self.add_relation(rel)?;
        Ok(strength)
    }
}