hippocampus: move MemoryNode + store ops to where they belong
MemoryNode moved from agent/memory.rs to hippocampus/memory.rs — it's a view over hippocampus data, not agent-specific. Store operations (set_weight, set_link_strength, add_link) moved into store/ops.rs. CLI code (cli/graph.rs, cli/node.rs) and agent tools both call the same store methods now. render_node() delegates to MemoryNode::from_store().render() — 3 lines instead of 40. Co-Authored-By: Proof of Concept <poc@bcachefs.org>
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10 changed files with 108 additions and 191 deletions
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@ -1,146 +0,0 @@
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// agent/memory.rs — Agent's live view of memory nodes
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//
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// MemoryNode is the agent's in-memory representation of a loaded
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// graph node. Unlike the store's Node (which has all the metadata),
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// this holds what the agent needs: the key, rendered content, and
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// links for navigation. The agent's context window tracks which
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// MemoryNodes are currently loaded.
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use crate::store::Store;
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/// A memory node loaded into the agent's working memory.
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#[derive(Debug, Clone)]
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pub struct MemoryNode {
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pub key: String,
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pub content: String,
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pub links: Vec<Link>,
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/// Version from the store — used for change detection.
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pub version: u32,
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/// Weight in the graph.
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pub weight: f32,
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}
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/// A link to a neighbor node.
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#[derive(Debug, Clone)]
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pub struct Link {
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pub target: String,
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pub strength: f32,
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/// Whether this link target is already referenced inline in the content.
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pub inline: bool,
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}
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impl MemoryNode {
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/// Load a node from the store by key. Returns None if not found.
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pub fn load(key: &str) -> Option<Self> {
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let store = Store::load().ok()?;
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Self::from_store(&store, key)
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}
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/// Load from an already-open store.
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pub fn from_store(store: &Store, key: &str) -> Option<Self> {
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let node = store.nodes.get(key)?;
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// Collect neighbor strengths
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let mut neighbors: std::collections::HashMap<&str, f32> = std::collections::HashMap::new();
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for r in &store.relations {
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if r.deleted { continue; }
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if r.source_key == key {
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let e = neighbors.entry(&r.target_key).or_insert(0.0);
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*e = e.max(r.strength);
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} else if r.target_key == key {
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let e = neighbors.entry(&r.source_key).or_insert(0.0);
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*e = e.max(r.strength);
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}
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}
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let mut links: Vec<Link> = neighbors.into_iter()
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.map(|(target, strength)| Link {
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inline: node.content.contains(target),
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target: target.to_string(),
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strength,
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})
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.collect();
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links.sort_by(|a, b| b.strength.total_cmp(&a.strength));
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Some(MemoryNode {
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key: key.to_string(),
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content: node.content.clone(),
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links,
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version: node.version,
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weight: node.weight,
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})
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}
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/// Render for inclusion in the context window.
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pub fn render(&self) -> String {
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let mut out = self.content.clone();
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// Footer: links not already referenced inline
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let footer_links: Vec<&Link> = self.links.iter()
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.filter(|l| !l.inline)
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.collect();
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if !footer_links.is_empty() {
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let total = footer_links.len();
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out.push_str("\n\n---\nLinks:");
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for link in footer_links.iter().take(15) {
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out.push_str(&format!("\n ({:.2}) `poc-memory render {}`",
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link.strength, link.target));
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}
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if total > 15 {
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out.push_str(&format!("\n ... and {} more (`poc-memory graph link {}`)",
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total - 15, self.key));
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}
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}
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out
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}
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/// Write content to the store and return an updated MemoryNode.
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pub fn write(key: &str, content: &str, provenance: Option<&str>) -> Result<Self, String> {
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let prov = provenance.unwrap_or("manual");
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let mut store = Store::load()?;
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store.upsert_provenance(key, content, prov)?;
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store.save()?;
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Self::from_store(&store, key)
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.ok_or_else(|| format!("wrote {} but failed to load back", key))
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}
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/// Search for nodes matching a query. Returns lightweight results.
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pub fn search(query: &str) -> Result<Vec<SearchResult>, String> {
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let store = Store::load()?;
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let results = crate::search::search(query, &store);
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Ok(results.into_iter().take(20).map(|hit| SearchResult {
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key: hit.key.clone(),
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score: hit.activation as f32,
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snippet: hit.snippet.unwrap_or_default(),
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}).collect())
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}
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/// Mark a node as used (boosts weight).
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pub fn mark_used(key: &str) -> Result<String, String> {
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let mut store = Store::load()?;
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if !store.nodes.contains_key(key) {
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return Err(format!("node not found: {}", key));
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}
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store.mark_used(key);
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store.save()?;
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Ok(format!("marked {} as used", key))
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}
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}
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/// A search result — lightweight, not a full node load.
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#[derive(Debug, Clone)]
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pub struct SearchResult {
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pub key: String,
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pub score: f32,
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pub snippet: String,
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}
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impl SearchResult {
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/// Format for display.
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pub fn render(&self) -> String {
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format!("({:.2}) {} — {}", self.score, self.key, self.snippet)
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}
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}
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@ -28,7 +28,6 @@ pub mod tools;
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pub mod ui_channel;
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pub mod journal;
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pub mod memory;
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pub mod runner;
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pub mod cli;
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pub mod context;
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@ -16,8 +16,6 @@
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use anyhow::Result;
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use tiktoken_rs::CoreBPE;
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use std::io::Write;
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use crate::agent::api::ApiClient;
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use crate::agent::journal;
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use crate::agent::log::ConversationLog;
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@ -445,7 +443,7 @@ impl Agent {
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match call.function.name.as_str() {
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"memory_render" | "memory_links" => {
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if let Some(key) = args.get("key").and_then(|v| v.as_str()) {
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if let Some(node) = crate::agent::memory::MemoryNode::load(key) {
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if let Some(node) = crate::hippocampus::memory::MemoryNode::load(key) {
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// Replace if already tracked, otherwise add
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if let Some(existing) = self.context.loaded_nodes.iter_mut()
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.find(|n| n.key == node.key) {
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@ -458,7 +456,7 @@ impl Agent {
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}
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"memory_write" => {
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if let Some(key) = args.get("key").and_then(|v| v.as_str()) {
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if let Some(node) = crate::agent::memory::MemoryNode::load(key) {
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if let Some(node) = crate::hippocampus::memory::MemoryNode::load(key) {
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// Refresh if already tracked
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if let Some(existing) = self.context.loaded_nodes.iter_mut()
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.find(|n| n.key == node.key) {
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@ -7,9 +7,9 @@
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use anyhow::{Context, Result};
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use serde_json::json;
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use crate::agent::memory::MemoryNode;
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use crate::hippocampus::memory::MemoryNode;
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use crate::agent::types::ToolDef;
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use crate::store::{self, Store};
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use crate::store::Store;
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pub fn definitions() -> Vec<ToolDef> {
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vec![
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@ -246,70 +246,18 @@ fn link_set(source: &str, target: &str, strength: f32) -> Result<String> {
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let mut store = Store::load().map_err(|e| anyhow::anyhow!("{}", e))?;
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let source = store.resolve_key(source).map_err(|e| anyhow::anyhow!("{}", e))?;
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let target = store.resolve_key(target).map_err(|e| anyhow::anyhow!("{}", e))?;
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let strength = strength.clamp(0.01, 1.0);
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let mut found = false;
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let mut first = true;
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for rel in &mut store.relations {
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if rel.deleted { continue; }
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if (rel.source_key == source && rel.target_key == target)
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|| (rel.source_key == target && rel.target_key == source)
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{
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if first {
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let old = rel.strength;
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rel.strength = strength;
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first = false;
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found = true;
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if (old - strength).abs() < 0.001 {
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return Ok(format!("{} ↔ {} already at {:.2}", source, target, strength));
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}
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} else {
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rel.deleted = true; // deduplicate
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}
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}
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}
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if !found {
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anyhow::bail!("no link found between {} and {}", source, target);
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}
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let old = store.set_link_strength(&source, &target, strength)
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.map_err(|e| anyhow::anyhow!("{}", e))?;
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store.save().map_err(|e| anyhow::anyhow!("{}", e))?;
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Ok(format!("set {} ↔ {} strength to {:.2}", source, target, strength))
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Ok(format!("set {} ↔ {} strength {:.2} → {:.2}", source, target, old, strength))
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}
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fn link_add(source: &str, target: &str, prov: &str) -> Result<String> {
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let mut store = Store::load().map_err(|e| anyhow::anyhow!("{}", e))?;
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let source = store.resolve_key(source).map_err(|e| anyhow::anyhow!("{}", e))?;
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let target = store.resolve_key(target).map_err(|e| anyhow::anyhow!("{}", e))?;
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// Check for existing link
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let exists = store.relations.iter().any(|r|
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!r.deleted &&
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((r.source_key == source && r.target_key == target) ||
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(r.source_key == target && r.target_key == source)));
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if exists {
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return Ok(format!("link already exists: {} ↔ {}", source, target));
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}
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let source_uuid = store.nodes.get(&source)
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.map(|n| n.uuid)
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.ok_or_else(|| anyhow::anyhow!("source not found: {}", source))?;
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let target_uuid = store.nodes.get(&target)
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.map(|n| n.uuid)
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.ok_or_else(|| anyhow::anyhow!("target not found: {}", target))?;
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// Compute initial strength from Jaccard similarity
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let graph = store.build_graph();
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let jaccard = graph.jaccard(&source, &target);
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let strength = (jaccard * 3.0).clamp(0.1, 1.0) as f32;
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let mut rel = store::new_relation(
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source_uuid, target_uuid,
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store::RelationType::Link, strength,
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&source, &target,
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);
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rel.provenance = prov.to_string();
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store.add_relation(rel).map_err(|e| anyhow::anyhow!("{}", e))?;
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let strength = store.add_link(&source, &target, prov)
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.map_err(|e| anyhow::anyhow!("{}", e))?;
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store.save().map_err(|e| anyhow::anyhow!("{}", e))?;
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Ok(format!("linked {} → {} (strength={:.2})", source, target, strength))
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}
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@ -317,14 +265,10 @@ fn link_add(source: &str, target: &str, prov: &str) -> Result<String> {
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fn weight_set(key: &str, weight: f32) -> Result<String> {
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let mut store = Store::load().map_err(|e| anyhow::anyhow!("{}", e))?;
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let resolved = store.resolve_key(key).map_err(|e| anyhow::anyhow!("{}", e))?;
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let weight = weight.clamp(0.01, 1.0);
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let node = store.nodes.get_mut(&resolved)
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.ok_or_else(|| anyhow::anyhow!("node not found: {}", resolved))?;
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let old = node.weight;
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node.weight = weight;
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let (old, new) = store.set_weight(&resolved, weight)
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.map_err(|e| anyhow::anyhow!("{}", e))?;
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store.save().map_err(|e| anyhow::anyhow!("{}", e))?;
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Ok(format!("weight {} {:.2} → {:.2}", resolved, old, weight))
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Ok(format!("weight {} {:.2} → {:.2}", resolved, old, new))
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}
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fn supersede(args: &serde_json::Value, prov: &str) -> Result<String> {
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@ -327,7 +327,7 @@ pub struct ContextState {
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/// Memory nodes currently loaded in the context window.
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/// Tracked so the agent knows what it's "seeing" and can
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/// refresh nodes after writes.
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pub loaded_nodes: Vec<crate::agent::memory::MemoryNode>,
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pub loaded_nodes: Vec<crate::hippocampus::memory::MemoryNode>,
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}
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pub const WORKING_STACK_INSTRUCTIONS: &str = "/home/kent/.config/poc-agent/working-stack.md";
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