subconscious: flatten agents/ nesting, move prompts in

agents/*.agent definitions and prompts/ now live under
src/subconscious/ alongside the code that uses them.
No more intermediate agents/ subdirectory.

Co-Authored-By: Proof of Concept <poc@bcachefs.org>

Cargo.lock

@@ -467,7 +467,6 @@ dependencies = [
  "iana-time-zone",
  "js-sys",
  "num-traits",
- "serde",
  "wasm-bindgen",
  "windows-link",
 ]
@@ -2759,33 +2758,6 @@ dependencies = [
  "time",
 ]
 
-[[package]]
-name = "poc-agent"
-version = "0.4.0"
-dependencies = [
- "anyhow",
- "base64 0.22.1",
- "chrono",
- "clap",
- "crossterm",
- "dirs",
- "figment",
- "futures",
- "glob",
- "json5",
- "libc",
- "ratatui",
- "reqwest",
- "serde",
- "serde_json",
- "tiktoken-rs",
- "tokio",
- "tui-markdown",
- "tui-textarea-2",
- "unicode-width",
- "walkdir",
-]
-
 [[package]]
 name = "poc-daemon"
 version = "0.4.0"

src/hippocampus/config.rs

@@ -108,7 +108,7 @@ impl Default for Config {
             ],
             llm_concurrency: 1,
             agent_budget: 1000,
-            prompts_dir: home.join("poc/memory/prompts"),
+            prompts_dir: home.join("poc/consciousness/src/subconscious/prompts"),
             agent_config_dir: None,
             api_base_url: None,
             api_key: None,

src/lib.rs

@@ -36,8 +36,8 @@ pub use hippocampus::{
 pub use hippocampus::query::engine as search;
 pub use hippocampus::query::parser as query_parser;
 
-pub use subconscious::agents;
+pub use subconscious as agents;
-pub use subconscious::agents::{
+pub use subconscious::{
     llm, audit, consolidate, knowledge,
     enrich, digest, daemon,
 };

src/subconscious/agents/mod.rs

@@ -1,28 +0,0 @@
-// Agent layer: LLM-powered operations on the memory graph
-//
-// Everything here calls external models (Sonnet, Haiku) or orchestrates
-// sequences of such calls. The core graph infrastructure (store, graph,
-// spectral, search, similarity) lives at the crate root.
-//
-//   llm          — model invocation, response parsing
-//   prompts      — prompt generation from store data
-//   defs         — agent file loading and placeholder resolution
-//   audit        — link quality review via Sonnet
-//   consolidate  — full consolidation pipeline
-//   knowledge    — agent execution, conversation fragment selection
-//   enrich       — journal enrichment, experience mining
-//   digest       — episodic digest generation (daily/weekly/monthly)
-//   daemon       — background job scheduler
-//   transcript   — shared JSONL transcript parsing
-
-pub mod transcript;
-pub mod api;
-pub mod llm;
-pub mod prompts;
-pub mod defs;
-pub mod audit;
-pub mod consolidate;
-pub mod knowledge;
-pub mod enrich;
-pub mod digest;
-pub mod daemon;

src/subconscious/defs.rs

@@ -88,7 +88,7 @@ fn parse_agent_file(content: &str) -> Option<AgentDef> {
 }
 
 fn agents_dir() -> PathBuf {
-    let repo = PathBuf::from(env!("CARGO_MANIFEST_DIR")).join("agents");
+    let repo = PathBuf::from(env!("CARGO_MANIFEST_DIR")).join("src/subconscious/agents");
     if repo.is_dir() { return repo; }
     crate::store::memory_dir().join("agents")
 }

src/subconscious/mod.rs

@@ -1,7 +1,28 @@
-// subconscious — autonomous agents that process without being asked
+// Agent layer: LLM-powered operations on the memory graph
 //
-// Reflect, surface, consolidate, digest, audit — the background
+// Everything here calls external models (Sonnet, Haiku) or orchestrates
-// processes that maintain and evolve the memory graph. Runs on
+// sequences of such calls. The core graph infrastructure (store, graph,
-// local models via the API backend.
+// spectral, search, similarity) lives at the crate root.
+//
+//   llm          — model invocation, response parsing
+//   prompts      — prompt generation from store data
+//   defs         — agent file loading and placeholder resolution
+//   audit        — link quality review via Sonnet
+//   consolidate  — full consolidation pipeline
+//   knowledge    — agent execution, conversation fragment selection
+//   enrich       — journal enrichment, experience mining
+//   digest       — episodic digest generation (daily/weekly/monthly)
+//   daemon       — background job scheduler
+//   transcript   — shared JSONL transcript parsing
 
-pub mod agents;
+pub mod transcript;
+pub mod api;
+pub mod llm;
+pub mod prompts;
+pub mod defs;
+pub mod audit;
+pub mod consolidate;
+pub mod knowledge;
+pub mod enrich;
+pub mod digest;
+pub mod daemon;