All node access now goes through index → capnp:
- scoring.rs: consolidation_priority, replay_queue, consolidation_plan
- admin.rs: cmd_init, cmd_fsck, cmd_dedup
- engine.rs: run_generator, eval_filter, run_transform
- parser.rs: resolve_field, execute_query
Added Store::remove_from_index() for dedup cleanup.
The relations Vec remains for now (used for graph building).
Co-Authored-By: Proof of Concept <poc@bcachefs.org>
Mutations (upsert_node, upsert_provenance, delete_node, rename_node)
now update redb indices atomically with capnp log appends, under the
same StoreLock.
Also removes dead cmd_import command and the parse.rs module it depended on.
Co-Authored-By: Proof of Concept <poc@bcachefs.org>
Remove AgentVisit, TranscriptSegment, and all related visit tracking code.
Provenance is what we've been using to track agent interaction with nodes.
Also removes dead fields from Node (state_tag, created).
-349 lines.
Co-Authored-By: Proof of Concept <poc@bcachefs.org>
Convert cmd_fsck to async and use access_local() for the cached store.
Still uses Store::load_from_logs() for fresh comparison.
Remove unused AnyView::load() method - was never called.
Remaining Store::load() calls are all internal caching infrastructure:
- persist.rs cached() for CACHED_STORE
- mod.rs access() fallback for STORE_ACCESS
Co-Authored-By: Proof of Concept <poc@bcachefs.org>
These were the last Store::load() calls that should use the shared store.
Remaining calls are intentional: fsck (needs both cached and fresh),
persist.rs cached() infrastructure, view.rs read-only fallback, and
access() bootstrap path.
Co-Authored-By: Proof of Concept <poc@bcachefs.org>
Replace Result<_, String> with anyhow::Result throughout:
- hippocampus/store module (persist, ops, types, view, mod)
- CLI modules (admin, agent, graph, journal, node)
- Run trait in main.rs
Use .context() and .with_context() instead of .map_err(|e| format!(...))
patterns. Add bail!() for early error returns.
Add access_local() helper in hippocampus/mod.rs that returns
Result<Arc<Mutex<Store>>> for direct local store access.
Fix store access patterns to properly lock Arc<Mutex<Store>> before
accessing fields in mind/unconscious.rs, mind/mod.rs, subconscious/learn.rs,
and hippocampus/memory.rs.
Co-Authored-By: Proof of Concept <poc@bcachefs.org>
- journal_tail returns Vec<JournalEntry> with key, content, created_at
- load_startup_journal uses typed API, no more direct Store access
- CLI does formatting, hippocampus returns data
Co-Authored-By: Proof of Concept <poc@bcachefs.org>
- hippocampus::memory_links now returns Vec<LinkInfo> with key,
link_strength, and node_weight for each neighbor
- Unified memory_tool! macro: mut/ref as token, single main rule
- All tools use serde serialize/deserialize for RPC consistency
- jsonargs handlers now work in client mode (RPC to daemon)
- cli/graph.rs formats LinkInfo for display
Co-Authored-By: Proof of Concept <poc@bcachefs.org>
Aligns function names with tool names for consistency:
- hippocampus: render → memory_render, write → memory_write, etc.
- tools/memory.rs: macro no longer prepends memory_ prefix
- CLI files: use typed async API throughout (graph.rs, journal.rs, admin.rs)
This eliminates the "memory_graph_topology" tool name bug where
graph_* and journal_* tools were incorrectly prefixed.
Co-Authored-By: Proof of Concept <poc@bcachefs.org>
- node.rs: use memory::* typed helpers instead of memory_rpc()
- main.rs: make Run trait async, await all command dispatch
- defs.rs: bridge get_group_content async via block_in_place
Co-Authored-By: Proof of Concept <poc@bcachefs.org>
Agents can use these to understand graph structure:
- trace: shows node and neighbors grouped by type
- link_impact: analyzes what happens if a link is removed
Co-Authored-By: Proof of Concept <poc@bcachefs.org>
Agents can use this to check if edge weights are skewed.
Dry run by default, pass apply:true to write changes.
Co-Authored-By: Proof of Concept <poc@bcachefs.org>
Agents can use graph_communities to discover isolated knowledge
clusters that need better integration.
Co-Authored-By: Proof of Concept <poc@bcachefs.org>
One function that uses memory_rpc (which handles daemon vs local).
Removes 65 lines of duplicate logic.
Co-Authored-By: Proof of Concept <poc@bcachefs.org>
Retrieval log was never used (history covers node log).
Params should come from config, not hardcoded store defaults.
Co-Authored-By: Proof of Concept <poc@bcachefs.org>
Remove term matching, pipeline stages, mmap/store paths. Just
pass keys to memory_search and print result. For anything fancy,
use memory_query.
-165 lines.
Co-Authored-By: Proof of Concept <poc@bcachefs.org>
Add get_group_content_rpc() which uses memory_query and memory_render
instead of direct store access. The original get_group_content() stays
for the subconscious path which already has a store open.
Co-Authored-By: Proof of Concept <poc@bcachefs.org>
- Add memory_history MCP tool for version history
- Convert cmd_history to use memory_rpc
- Add raw parameter to memory_render for editing
- Remove unused: dump-json, list-edges, lookup-bump, lookups
- Fix render_node path in defs.rs/subconscious.rs
Co-Authored-By: Proof of Concept <poc@bcachefs.org>
Add raw parameter to memory_render for getting content without
links footer. cmd_edit now uses memory_render(raw=true) to read
and memory_write to save.
Co-Authored-By: Proof of Concept <poc@bcachefs.org>
These were early experiments with manual feedback signals that
never worked well. The scoring system will handle this properly.
Removed:
- CLI: used, wrong, not-relevant, not-useful, gap
- MCP: memory_used
- Store: mark_used, mark_wrong, record_gap, modify_node
Co-Authored-By: Proof of Concept <poc@bcachefs.org>
- Remove TurnResult.text (was dead code - Agent::turn handles text internally)
- Simplify run_with_backend to just iterate over steps (Agent::turn loops
for tool calls and handles empty responses internally)
- Change run/run_shared/run_forked_shared to return Result<(), String>
- Remove AgentResult.output field (no callers used it)
- Stub out legacy text-parsing code (audit, compare) that needs redesign
- Update digest.rs to not depend on text return
- Add level parameter to journal_new/journal_update for digest support
Co-Authored-By: Proof of Concept <poc@bcachefs.org>
PEG parser now handles both expression syntax (degree > 5 | sort degree)
and pipeline syntax (all | type:episodic | sort:timestamp). Deleted
Stage::parse() and helpers from engine.rs — it's now pure execution.
All callers use parse_stages() from parser.rs as the single entry point.
Co-Authored-By: Proof of Concept <poc@bcachefs.org>
Text cosine similarity was being used as a crutch for operations
the graph structure should handle: interference detection, orphan
linking, triangle closing, hub differentiation. These are all
graph-structural operations that the agents (linker, extractor)
handle with actual semantic understanding.
Removed: similarity.rs (stemming + cosine), rewrite.rs (orphan
linking, triangle closing, hub differentiation), detect_interference,
and all CLI commands and consolidation steps that used them.
-794 lines.
Co-Authored-By: Proof of Concept <poc@bcachefs.org>
The background daemon and its job orchestration are redundant now that
the consciousness binary handles everything directly. Gut daemon.rs
down to just GraphHealth + compute_graph_health (used by the F4 TUI
screen), remove the DaemonCmd CLI subcommand, strip daemon RPC
fast-paths from cli/agent.rs, and drop the jobkit dependency.
-1330 lines.
Co-Authored-By: Proof of Concept <poc@bcachefs.org>
Byte-position truncation (&s[..s.len().min(N)]) panics when position
N lands inside a multi-byte character. Fixed in parser debug logging,
API error messages, oneshot response logging, and CLI agent display.
Also fixed tool dispatch permissions (removed global fallback).
Co-Authored-By: Proof of Concept <poc@bcachefs.org>
Add Log variant to ConversationEntry that serializes to the
conversation log but is filtered out on read-back and API calls.
AutoAgent writes debug/status info (turns, tokens, tool calls)
through the conversation log instead of a callback parameter.
Removes the log callback from run_one_agent, call_api_with_tools,
and all callers.
Co-Authored-By: Proof of Concept <poc@bcachefs.org>
Spectral decomposition (eigenvalue computation) removed — it was
only used by the spectral-save CLI command. The spectral embedding
reader and query engine features remain (they load pre-computed
embeddings from disk, no faer needed).
Removes: faer, nano-gemm, private-gemm, and ~220 other transitive
dependencies. Significant build time and artifact size reduction.
Co-Authored-By: Kent Overstreet <kent.overstreet@linux.dev>
channel-test was a debug tool, mcp-schema was superseded by
consciousness-mcp, cmd_mcp_schema in cli/misc.rs was the old
poc-memory subcommand.
Co-Developed-By: Kent Overstreet <kent.overstreet@linux.dev>
Separates the Claude-specific daemon (idle timer, tmux pane detection,
prompt injection, RPC server, session hooks) from the universal
infrastructure (channels, supervisor, notify, daemon protocol).
thalamus/ now contains only substrate-independent code: the channel
client/supervisor, notification system, daemon_capnp protocol, and
shared helpers (now(), home()).
claude/ contains: idle.rs, tmux.rs, context.rs, rpc.rs, config.rs,
hook.rs (moved from subconscious/), plus the daemon CLI and server
startup code from thalamus/mod.rs.
All re-exports preserved for backward compatibility.
Co-Authored-By: Proof of Concept <poc@bcachefs.org>
